Around the same time, Yoda is on Kashyyyk, the Wookiee homeworld, helping lead a battle with the Wookiees against Separatist forces. During the battle, the Clones are given new orders, inciting the duty to eliminate their Jedi leaders, who've now been reported as traitors. In a triumphant escape, along with the help of the Wookiees Tarful and Chewbacca, Yoda escapes. They allow him to use one of their escape pods in order to get off the planet undetected.
The Tantive IV enters the Kashyyyk system on silent running, without active scanning - it is still a combat zone.
Using a Jedi homing beacon that was stolen by Captain Antilles from Master Saesee Tiin's Jedi Fighter, Senator Bail Organa is looking for a certain survivor...
The scan tech frowned at his screen.
"It's... Wookiee, sir. That doesn't make any sense. Why would a Wookiee escape pod be outbound from Kashyyyk?"
"Lifesigns?" asks Bail.
"Yes, well, maybe..."
After returning to Coruscant, Yoda and Obi-Wan quickly make their way to the Jedi Temple, recently assaulted by a team lead by Anakin. In a gallant effort to save the Jedi throughout the galaxy, the two Jedi switch the Jedi beacons from “Return home” to “Run for Cover.”
However, Obi-Wan can’t help but watch the recordings from the Temple’s camera system. To his horror, he witnesses the murder of the Jedi Younglings by Anakin Skywalker.
Obi-Wan visits Padme and reveals to her the truth about Anakin; the slaughter in the Temple, his allegiance to Sith... He asks her if she knows where Anakin is: she says “no.”
He also knows that Padme is a woman who does not stay still. So he waits for her to board her Royal Naboo Starship with Threepio and Artoo. Just as the ramp into the ship is about to close, Obi-Wan secretly stows away aboard the ship.
With Obi-Wan hidden aboard Senator Amidala's Naboo Skiff, and on his way to the secret location of his former student, Anakin Skywalker, Yoda makes his way to the Galactic Senate - now the Imperial Senate where the Emperor resides.
Meanwhile, on Mustafar, Darth Sidious contacts the Separatist leaders and informs them he's sending someone to join them.
Once arrived, Anakin does as he was instructed.
Chapter 7: Clash of the Titans